PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0079s0500.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 400aa    MW: 44166.8 Da    PI: 4.9615
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0079s0500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.24e-208616654128
                     NAM  54 eekewyfFskrdkkyatgkrknratk.....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                             + +  +fF+++ k+y+tg+rk+r+++     + +W++tg++k+v+  +g ++g+kk++v+y  + r  k+ekt+Wvmh+y+l
  SapurV1A.0079s0500.2.p  86 DGSISHFFHRAIKAYNTGTRKRRKIQggdfgDVRWHKTGRTKPVIL-DGVQKGCKKIMVLYtsTVRGGKAEKTNWVMHQYHL 166
                             44556******************97734444567************.99************5545888999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100515.31126185IPR003441NAC domain
SuperFamilySSF1019414.05E-3142185IPR003441NAC domain
PfamPF023652.4E-1359166IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MAGPWLVDGN RFATKIKSAS SASNLEGVAW KSDPCKTCPN CHHVIDNSDV VQEWPGLPGG  60
VKFDPSDQEI IWHLLAKVGN GGVKQDGSIS HFFHRAIKAY NTGTRKRRKI QGGDFGDVRW  120
HKTGRTKPVI LDGVQKGCKK IMVLYTSTVR GGKAEKTNWV MHQYHLGTGE DERDGEDVVS  180
KIFYQQQATN KGEKPEEDLS EIANAVVVKV DPVTPKSITP DPPRAERRCQ DFDSGKKSTN  240
VCTEPCAEHS GVENLEEANF QHESPCYNYQ PEMENHVDQM VGDNDNCADE GTKWWDSESQ  300
HLLDSQQLVE GLSLCDEFLQ SQSPSDGGHG RTGASGKSGL SDYAHLGPDH LKKDLEECQN  360
LELDPANIEL DTPPEFRLSQ LEFGSQDSFM AWGEGRVAD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002311435.10.0hypothetical protein POPTR_0008s11550g
SwissprotQ6NQK21e-150NAC8_ARATH; NAC domain-containing protein 8
TrEMBLB9HIY70.0B9HIY7_POPTR; Uncharacterized protein
STRINGPOPTR_0008s11550.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-152NAC family protein